Project information
Proteins in metabolism and interaction of organisms with the environment
- Project Identification
- MSM0021622413
- Project Period
- 1/2005 - 12/2011
- Investor / Pogramme / Project type
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Ministry of Education, Youth and Sports of the CR
- Research Intents
- MU Faculty or unit
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Faculty of Science
- prof. RNDr. Jaroslav Koča, DrSc.
- Other MU Faculty/Unit
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Central European Institute of Technology
- Keywords
- proteins, structure function relationships, protein complexes, proteome, metabolome
The proposal is the follow up of the previous, in our view successful, long-term research plan "Structure-Function Relationships of Biomolecules and their Role in Metabolism" studied in 1998-2004, and partly the project "Laboratory of Structure and Dynamics of Biomolecules" in the framework of program "250" studied in 1996-2000. The results of these projects were published in tens of scientific articles communicated in renowned international journals with high impact factors. The key aim was identification and characterization of low molecular weight substances involved in metabolism of bacteria and fungi with the special attention devoted to biochemical activities and the structure.
This new proposal will deal with other proteins from various organisms, for example animal proteins binding pheromones or proteins interacting with sacharides. The function and regulation of enzymes will be studied by novel methods suitable for monitoring of in vivo activity via monitoring of intracellular metabolites. We will continue to use structural methods. Keywords of the long-term research plan are protein, its function, structure, structure-function relationships and complexes of proteins. More general keywords are proteome and metabolome. The project will focus on such hot topics of current life sciences like protein/DNA interactions, synthesis of proteins on ribosome or applications of photo-labile groups for directed geometrical changes of protein-substrate complexes and regulation of enzymatic reactions.
Publications
Total number of publications: 835
2007
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Využití MALDI-MS celobuněčných profilů při charakterizaci bakterií rodu Aeromonas
Year: 2007, type: Conference abstract
2006
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13C-detected spin-state selective experiments for measuring scalar and dipolar coupling in nucleic acid bases
21th NMR Valtice, year: 2006
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1H, 13C, and 15N resonance assignment of Bombyx mori chemosensory protein 1 (BmorCSP1)
Journal of Biomolecular NMR, year: 2006, volume: 36, edition: 5
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A case-control study of the relationship between 13 candidate genes and ADHD
American Journal of Medical Genetics, year: 2006, volume: 141B, edition: 7
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A search for the molecular basis of mental disorders
Folia Mendeliana, year: 2006, volume: 2005/2006, edition: 40-41
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Acidophilic bacteria in sulfuric acid formation: Variability of metabolic parameters
Year: 2006, type: Conference abstract
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Application of 13C-detected experiments to NMR spectroscopy of nucleic acids
Protonless NMR, year: 2006
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Binding of different monosaccharides by lectin PA-IIL from Pseudomonas aeruginosa: Thermodynamics data correlated with X-ray structures
FEBS Letters, year: 2006, volume: 580, edition: 2
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Biochemical characterization of the RECQ4 protein, mutated in Rothmund-Thomson syndrome
DNA Repair, year: 2006, volume: 2, edition: 5
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Biooxidation of elemental sulfur and its impacts on metabolic parameters in Acidithiobacillus ferrooxidans
X. Pracovní setkání biochemiků a molekulárních biologů, year: 2006