Project information
Proteins in metabolism and interaction of organisms with the environment
- Project Identification
- MSM0021622413
- Project Period
- 1/2005 - 12/2011
- Investor / Pogramme / Project type
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Ministry of Education, Youth and Sports of the CR
- Research Intents
- MU Faculty or unit
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Faculty of Science
- prof. RNDr. Jaroslav Koča, DrSc.
- Other MU Faculty/Unit
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Central European Institute of Technology
- Keywords
- proteins, structure function relationships, protein complexes, proteome, metabolome
The proposal is the follow up of the previous, in our view successful, long-term research plan "Structure-Function Relationships of Biomolecules and their Role in Metabolism" studied in 1998-2004, and partly the project "Laboratory of Structure and Dynamics of Biomolecules" in the framework of program "250" studied in 1996-2000. The results of these projects were published in tens of scientific articles communicated in renowned international journals with high impact factors. The key aim was identification and characterization of low molecular weight substances involved in metabolism of bacteria and fungi with the special attention devoted to biochemical activities and the structure.
This new proposal will deal with other proteins from various organisms, for example animal proteins binding pheromones or proteins interacting with sacharides. The function and regulation of enzymes will be studied by novel methods suitable for monitoring of in vivo activity via monitoring of intracellular metabolites. We will continue to use structural methods. Keywords of the long-term research plan are protein, its function, structure, structure-function relationships and complexes of proteins. More general keywords are proteome and metabolome. The project will focus on such hot topics of current life sciences like protein/DNA interactions, synthesis of proteins on ribosome or applications of photo-labile groups for directed geometrical changes of protein-substrate complexes and regulation of enzymatic reactions.
Publications
Total number of publications: 835
2005
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2,5-Dimethylphenacyl carbonates: A photoremovable protecting group for alcohols and phenols
Photochemical and Photobiological Sciences, year: 2005, volume: 4, edition: 1
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Activation of different defence-related genes expression by ergosterol
FEBS Journal, Abstract of 30th FEBS Congress, year: 2005
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Amperometric flow-injection determination of phenolic compounds using a biosensor with immobilised laccase, peroxidase and tyrosinase
Electroanalysis, year: 2005, volume: 17, edition: 23
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Amperometric screen-printed biosensor arrays with co-immobilised oxidoreductases and cholinesterases
Analytica Chimica Acta, year: 2005, volume: 528, edition: 1
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Analysis of NMR Distance Restraints - An Application To DNA and RNA Hairpins
Konference mladých vědeckých pracovníků "Strukturní biofyzika makromolekul", year: 2005
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Bacterial oxidation of elemental sulfur: changes in metabolic parameters
9th Conference on Environment and Mineral Processing, year: 2005
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Bakteriální produkce síranů ve vztahu k biokorozi betonu
IX. konference Ekologie a nové stavební hmoty a výrobky, year: 2005
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Ca2+-dependent lipid binding and membrane integration of PopA, a hairpin-like elicitor of the hypersenzitive response in tobacco
Molecular Microbiology, year: 2005, volume: 58, edition: 5
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CICADA: Parallelization and Related Problems
Workshop on Modeling Interactions in Biomolecules II, year: 2005
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Comparative density-functional study of the electron paramagnetic resonance parameters of amavadin
Journal of Physical Chemistry B, year: 2005, volume: 109, edition: 9