Non-Watson-Crick Base Pairing and Hydration in RNA motifs: Molecular Dynamics of 5S rRNA Loop E
Authors | |
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Year of publication | 2003 |
Type | Article in Proceedings |
Conference | Journal of Biomolecular Structure and Dynamics |
MU Faculty or unit | |
Citation | |
Field | Biophysics |
Keywords | molecular dynamics simulations; Loop E motifs; non-Watson-Crick base pairs; ordered hydration; 5S rRNA. |
Description | Internal loops are common elements of RNA secondary structure. They often form binding sites for metals, proteins and other RNAs. To under-stand the effects of internal loops on RNA structure and function, we have carried out molecular dynamics simula-tions on two RNA Eloop motifs |
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