Project information
Determination of markers, screening and early diagnostics of cancer diseases using highly automated processing of multidimensional biomedical images (Biomarker)

Information

This project doesn't include Faculty of Medicine. It includes Faculty of Informatics. Official project website can be found on muni.cz.

Project Identification

2B06052

Project Period

7/2006 - 6/2011

Investor / Pogramme / Project type

Ministry of Education, Youth and Sports of the CR

Health and quality of life

MU Faculty or unit

Faculty of Informatics

prof. RNDr. Michal Kozubek, Ph.D.

Keywords

zpracování obrazu; optická mikroskopie; buněčné jádro; prostorové uspořádání; exprese genů; mikročipy; nádorová onemocnění; diagnostické markery

Cooperating Organization

Brno University of Technology

Responsible person doc. RNDr. Pavel Smrž, Ph.D.

CAMEA Ltd.

Responsible person Ing. Miloslav Richter, Ph.D.

The aim of the project is to develop new approaches to the processing of image data from fluorescence microscopy and microarrays that, in combination with the research in genomics and proteomics techniques, will help with the determination of markers, screening and early diagnostics of cancer diseases.

Results

Publications

Total number of publications: 121

2008

3D OptiGen 0.2

SVOBODA David MAŠKA Martin SKALICKÝ Jan KOZUBEK Michal STEJSKAL Stanislav

Year: 2008
Acquiarium version 1.6

MATULA Pavel DANĚK Ondřej MAŠKA Martin VINKLER Marek

Year: 2008
An Adaptive Algorithm for Multimodal Focus Functions in Automated Fluorescence Microscopy

BRÁZDILOVÁ Silvie Luisa KOZUBEK Michal

Article in Proceedings

Medical Imaging Conference, year: 2008
Arbitrarily-Oriented Anisotropic 3D Gaussian Filtering Computed with 1D Convolutions without Interpolation

ULMAN Vladimír

Article in Proceedings

Proceedings of 8th WSEAS International Conference on Signal Processing, Computational Geometry and Artificial Vision, year: 2008
cDNA Microarray: Gene Expression Profiling of Small Cell Populations

PETERKOVÁ Martina KOUTNÁ Irena TESAŘOVÁ Lenka POTĚŠILOVÁ Michaela RUČKA Zdeněk HRABČÁKOVÁ Viera KLABUSAY Martin

Conference abstract

Year: 2008, type: Conference abstract
Gene Expression differences in bone marrow hematoietic stem cell subpopulation

KOUTNÁ Irena KOUTNÁ Irena KLABUSAY Martin PETERKOVÁ Martina HRABČÁKOVÁ Viera POTĚŠILOVÁ Michaela KRONTORÁD Petr KOZUBEK Michal

Conference abstract

Year: 2008, type: Conference abstract
Gene Expression Profiling During Ex Vivo Granulopoiesis: a Possible Tool for Quality Assessment of CD34+ Cells from Lymphoma Patients

TESAŘOVÁ Lenka KOUTNÁ Irena KLABUSAY Martin HRABČÁKOVÁ Viera KRONTORÁD Petr

Conference abstract

Year: 2008, type: Conference abstract
High-Resolution Image Cytometry of a Large Number of 3D Confocal FISH and Immunofluorescence Stained Cells

MATULA Pavel MAŠKA Martin DANĚK Ondřej MATULA Petr STEJSKAL Stanislav ONDŘEJ Vladan KOZUBEK Michal

Conference abstract

Year: 2008, type: Conference abstract
Interactions of apoptotic proteins AIF and endonuclease G analyzed by bioinformatic predictions, molecular docking, and fluorescent microscopy

VAŘECHA Miroslav ZIMMERMANN Michal AMRICHOVÁ Jana ULMAN Vladimír KOZUBEK Michal

Conference abstract

Year: 2008, type: Conference abstract
New approaches to automated cell image acquisition and analysis using fluorescence microscopy

VAŘECHA Miroslav MATULA Pavel KOZUBEK Michal

Year: 2008, type: